File List

Here is a list of all files with brief descriptions:

a2b_edge_adm.F90
a2b_edge_nlm.F90
a2b_edge_tlm.F90
ACCoeff_Binary_IO.f90
ACCoeff_Define.f90
Accumulator.h
ADA_Module.f90
adBuffer.f
adStack.c
advect_pv.f90
advect_pv_ad.f90
advect_pv_tl.f90
AerosolCoeff_Binary_IO.f90
AerosolCoeff_Define.f90
affinity.c
amip_interp.F90
AOvar_Define.f90
Application.h
astronomy.F90
ASvar_Define.f90
atmos_ocean_fluxes.F90
axis_utils.F90
Azimuth_Emissivity_F6_Module.f90
Azimuth_Emissivity_Module.f90
Binary_File_Utility.f90
bldriver.F90
block_control.F90	Contains the block_control_mod module
blsimp.F90
BMatrix.h
boundary_adm.F90
boundary_nlm.F90
boundary_tlm.F90
Browser.py
c2f.py
c_qg_bmatrix.f90
c_qg_bstddev.f90
c_qg_model.F90
c_qg_obs_data.F90
calc_pv.f90
calc_pv_ad.f90
calc_pv_tl.f90
ChangeVar.cc
ChangeVar.h
cloud.F90
cloud_ad.F90
cloud_interpolator.F90
cloud_tl.F90
CloudCoeff_Binary_IO.f90
CloudCoeff_Define.f90
cloudradcouple.F90
column_diagnostics.F90
Common_RTSolution.f90
Compare_Float_Numbers.f90
conf.py
constant.h
constants.F90
constants.h
ControlIncrement.h
ControlVariable.h
convection.F90
convection_ad.F90
convection_tl.F90
CostFct3DVar.h
CostFct4DEnsVar.h
CostFct4DVar.h
CostFctWeak.h
CostFunction.h
CostJb3D.h
CostJb4D.h
CostJbJq.h
CostJbState.h
CostJbTotal.h
CostJcDFI.h
CostJo.h
CostTermBase.h
coupler_types.F90
ioda/tools/cpplint.py
oops/tools/cpplint.py
ufo/tools/cpplint.py
create_xgrid.c
create_xgrid.h
CRTM_Adjoint_Module.f90
CRTM_Aerosol_Define.f90
CRTM_AerosolCoeff.f90
CRTM_AerosolScatter.f90
CRTM_AncillaryInput_Define.f90
CRTM_AntennaCorrection.f90
CRTM_AOD_Module.f90
CRTM_AtmAbsorption.f90
CRTM_AtmOptics.f90
CRTM_AtmOptics_Define.f90
CRTM_Atmosphere.f90
CRTM_Atmosphere_Define.f90
CRTM_ChannelInfo_Define.f90
CRTM_Cloud_Define.f90
CRTM_CloudCoeff.f90
CRTM_CloudScatter.f90
CRTM_Fastem1.f90
CRTM_FastemX.f90
CRTM_Forward_Module.f90
CRTM_Geometry_Define.f90
CRTM_GeometryInfo.f90
CRTM_GeometryInfo_Define.f90
CRTM_Interpolation.f90
CRTM_IR_Ice_SfcOptics.f90
CRTM_IR_Land_SfcOptics.f90
CRTM_IR_Snow_SfcOptics.f90
CRTM_IR_Water_SfcOptics.f90
CRTM_IRiceCoeff.f90
CRTM_IRlandCoeff.f90
CRTM_IRsnowCoeff.f90
CRTM_IRSSEM.f90
CRTM_IRwaterCoeff.f90
CRTM_K_Matrix_Module.f90
CRTM_LifeCycle.f90
CRTM_LowFrequency_MWSSEM.f90
CRTM_Model_Profiles.f90
CRTM_Module.F90
CRTM_MoleculeScatter.f90
CRTM_MW_Ice_SfcOptics.f90
CRTM_MW_Land_SfcOptics.f90
CRTM_MW_Snow_SfcOptics.f90
CRTM_MW_Water_SfcOptics.f90
CRTM_MWwaterCoeff.f90
CRTM_NLTECorrection.f90
CRTM_Options_Define.f90
CRTM_Parameters.f90
CRTM_Planck_Functions.f90
CRTM_Predictor.f90
CRTM_Predictor_Define.f90
CRTM_RTSolution.f90
CRTM_RTSolution_Define.f90
CRTM_SEcategory.f90
CRTM_SensorData_Define.f90
CRTM_SensorInfo.f90
CRTM_SfcOptics.f90
CRTM_SfcOptics_Define.f90
CRTM_SpcCoeff.f90
CRTM_Surface_Define.f90
CRTM_Tangent_Linear_Module.f90
CRTM_TauCoeff.f90
CRTM_Utility.f90
CRTM_Version.inc
CRTM_VIS_Ice_SfcOptics.f90
CRTM_VIS_Land_SfcOptics.f90
CRTM_VIS_Snow_SfcOptics.f90
CRTM_VIS_Water_SfcOptics.f90
CRTM_VISiceCoeff.f90
CRTM_VISlandCoeff.f90
CRTM_VISsnowCoeff.f90
CRTM_VISwaterCoeff.f90
CSvar_Define.f90
data_override.F90
Date_Utility.f90
DateTime_Utility.f90
dcmip_initial_conditions_test_1_2_3_v5.f90
dcmip_initial_conditions_test_4_v3.f90
Departures.h
diag_axis.F90
diag_data.F90
diag_grid.F90
diag_integral.F90	Contains the diag_integral_mod module
diag_manager.F90
diag_manifest.F90
diag_output.F90
diag_table.F90
diag_util.F90
DiagonalMatrix.h
Dirac.h
DolphChebyshev.cc
DolphChebyshev.h
DRGMRESRMinimizer.h
drifters.F90
drifters_comm.F90
drifters_compute_k.h
drifters_core.F90
drifters_input.F90
drifters_io.F90
drifters_push.h
drifters_set_field.h
DRIPCGMinimizer.h
DRMinimizer.h
DRPCGMinimizer.h
DRPFOMMinimizer.h
DRPLanczosMinimizer.h
DualMinimizer.h
DualVector.h
dyn_core_adm.F90
dyn_core_nlm.F90
dyn_core_tlm.F90
Ellison.f90
Emission_Module.f90
Endian_Utility.f90
ensemble_manager.F90
EnsembleCovariance.h
EnsemblesCollection.h
EnsForecasts.h
EnsHofX.cc
EnsHofX.h
oops/interface/ErrorCovariance.h
test/interface/ErrorCovariance.h
ErrorCovarianceBUMP.h
ErrorCovarianceFV3JEDI.cc
ErrorCovarianceFV3JEDI.h
ErrorCovarianceFV3JEDIFortran.h
ErrorCovarianceL95.cc
ErrorCovarianceL95.h
ErrorCovarianceQG.cc
ErrorCovarianceQG.h
ErrorStdDevQG.cc
ErrorStdDevQG.h
EstimateParams.h
example.h
ExampleHeader.h
Experiment.py
external_ic_nlm.F90
external_sst_nlm.F90
ExternalDFI.h
fastexp_nlm.c
fft.F90	Contains the fft_mod module
fft99.F90
fft_f.cc
fft_f.h
fft_mod.F90
FGMRES.h	FGMRES solver for Ax=b
FGMRESMinimizer.h
field_manager.F90
FieldL95.cc
FieldL95.h
FieldsQG.cc
FieldsQG.h
File_Utility.f90
file_version.h
FilterBase.h
FitCoeff_Define.f90
FitCoeff_Destroy.inc
FitCoeff_Equal.inc
FitCoeff_Info.inc
FitCoeff_ReadFile.inc
FitCoeff_SetValue.inc
FitCoeff_WriteFile.inc
fm_util.F90
fms.F90
fms_io.F90
fms_io_unstructured_field_exist.inc
fms_io_unstructured_file_unit.inc
fms_io_unstructured_get_field_size.inc
fms_io_unstructured_get_file_name.inc
fms_io_unstructured_get_file_unit.inc
fms_io_unstructured_read.inc
fms_io_unstructured_register_restart_axis.inc
fms_io_unstructured_register_restart_field.inc
fms_io_unstructured_save_restart.inc
fms_io_unstructured_setup_one_field.inc
fms_platform.h
fms_switches.h
Foam_Utility_Module.f90
Forecast.cc
Forecast.h
fv3-jedi/src/Utilities/Fortran.h
ioda/src/ioda/Fortran.h
ufo/src/ufo/Fortran.h
FortranAtmosphere.h
FortranBndGSI.h
FortranBndROPP1D.h
FortranConstituents.h
FortranGeoVals.h
FortranMarine.h
FortranObsCheck.h
FortranRefGSI.h
Fresnel.f90
FtnTriDiagSpectrum.F90
FullGMRES.h	FullGMRES solver for Ax=b
Fundamental_Constants.f90
fv3jedi4DVar.cc
fv3jedi_constants_mod.f90
fv3jedi_covariance_interface_mod.F90
fv3jedi_covariance_mod.f90
fv3jedi_geom_interface_mod.F90
fv3jedi_geom_mod.f90
fv3jedi_getvalues_mod.f90
fv3jedi_getvalues_traj_mod.F90
fv3jedi_increment_interface_mod.f90
fv3jedi_increment_io_mod.f90
fv3jedi_increment_mod.f90
fv3jedi_increment_utils_mod.F90
fv3jedi_kinds_mod.f90
fv3jedi_lm_const_mod.F90
fv3jedi_lm_dynamics_mod.F90
fv3jedi_lm_kinds_mod.F90
fv3jedi_lm_mod.F90
fv3jedi_lm_moist_mod.F90
fv3jedi_lm_physics_mod.F90
fv3jedi_lm_turbulence_mod.F90
fv3jedi_lm_utils_mod.F90
fv3jedi_model_interface_mod.F90
fv3/fv3jedi_model_mod.f90
geos/fv3jedi_model_mod.f90
gfs/fv3jedi_model_mod.f90
fv3jedi_setup_mod.f90
fv3jedi_state_interface_mod.f90
fv3jedi_state_io_mod.f90
fv3jedi_state_mod.f90
fv3jedi_state_utils_mod.F90
fv3jedi_tlm_interface_mod.F90
fv3jedi_tlm_mod.f90
fv3jedi_traj_interface_mod.F90
fv3jedi_traj_mod.f90
fv3jedi_varcha_c2m_interface_mod.F90
fv3jedi_varcha_c2m_mod.f90
fv3jedi_vars_mod.f90
fv3jediDirac.cc
fv3jediEstimateParams.cc
fv3jediForecast.cc
fv3jediHofX.cc
fv3jediLinearForecast.cc
FV3JEDITraits.h
fv_arrays_nlm.F90
fv_arrays_tlmadm.F90
fv_climate_nudge_nlm.F90
fv_cmp_nlm.F90
fv_control_nlm.F90
fv_control_tlmadm.F90
fv_diagnostics_nlm.F90
fv_dynamics_adm.F90
fv_dynamics_nlm.F90
fv_dynamics_tlm.F90
fv_eta_nlm.F90
fv_fill_nlm.F90
fv_grid_tools_nlm.F90
fv_grid_utils_adm.F90
fv_grid_utils_nlm.F90
fv_grid_utils_tlm.F90
fv_io_nlm.F90
fv_mapz_adm.F90
fv_mapz_nlm.F90
fv_mapz_tlm.F90
fv_mp_adm.F90
fv_mp_nlm_mod.F90
fv_mp_tlm.F90
fv_nesting_adm.F90
fv_nesting_nlm.F90
fv_nesting_tlm.F90
fv_nudge_nlm.F90
fv_pressure.F90
fv_restart_adm.F90
fv_restart_nlm.F90
fv_restart_tlm.F90
fv_sg_adm.F90
fv_sg_nlm.F90
fv_sg_tlm.F90
fv_surf_map_nlm.F90
fv_timing_nlm.F90
fv_tracer2d_adm.F90
fv_tracer2d_nlm.F90
fv_tracer2d_tlm.F90
fv_treat_da_inc_nlm.F90
fv_update_phys_nlm.F90
gaussian_topog.F90
GenEnsPertB.cc
GenEnsPertB.h
GeneralizedDepartures.h
generate_locations.f90
GeoLocation.h
oops/interface/Geometry.h
test/interface/Geometry.h
GeometryFV3JEDI.cc
GeometryFV3JEDI.h
GeometryFV3JEDIFortran.h
oops/interface/GeometryIterator.h
test/interface/GeometryIterator.h
GeometryQG.cc
GeometryQG.h
GeometryQGIterator.cc
GeometryQGIterator.h
GeoVaLs.cc
oops/src/oops/interface/GeoVaLs.h
oops/src/test/interface/GeoVaLs.h
ufo/src/ufo/GeoVaLs.h
GeoVaLsWriter.h
get_cal_time.F90
GetValuesTrajFV3JEDI.cc
GetValuesTrajFV3JEDI.h
GetValuesTrajFV3JEDIFortran.h
GMRESR.h	GMRESR solver for Ax=b
GMRESRMinimizer.h
gnssro_mod_constants.F90
gnssro_mod_grids.F90
gnssro_mod_transform.F90
src/lorenz95/GomL95.cc
test/lorenz95/GomL95.cc
GomL95.h
GomQG.cc
GomQG.h
gradient.F90
gradient_c2l.c
gradient_c2l.h
grid.F90
GridPoint.h
group_update_pack.inc
group_update_unpack.inc
gsidiag_aod_bin2nc4.f90
gsidiag_bin2txt.f90
gsidiag_conv_bin2nc4.f90
gsidiag_rad_bin2nc4.f90
gsiprofiles_bin2nc4.f90
gsw_add_barrier.f90
gsw_add_mean.f90
gsw_adiabatic_lapse_rate_from_ct.f90
gsw_adiabatic_lapse_rate_ice.f90
gsw_alpha.f90
gsw_alpha_on_beta.f90
gsw_alpha_wrt_t_exact.f90
gsw_alpha_wrt_t_ice.f90
gsw_beta.f90
gsw_beta_const_t_exact.f90
gsw_c_from_sp.f90
gsw_cabbeling.f90
gsw_check_functions.f90
gsw_chem_potential_water_ice.f90
gsw_chem_potential_water_t_exact.f90
gsw_cp_ice.f90
gsw_ct_first_derivatives.f90
gsw_ct_first_derivatives_wrt_t_exact.f90
gsw_ct_freezing.f90
gsw_ct_freezing_exact.f90
gsw_ct_freezing_first_derivatives.f90
gsw_ct_freezing_first_derivatives_poly.f90
gsw_ct_freezing_poly.f90
gsw_ct_from_enthalpy.f90
gsw_ct_from_enthalpy_exact.f90
gsw_ct_from_entropy.f90
gsw_ct_from_pt.f90
gsw_ct_from_rho.f90
gsw_ct_from_t.f90
gsw_ct_maxdensity.f90
gsw_ct_second_derivatives.f90
gsw_deltasa_atlas.f90
gsw_deltasa_from_sp.f90
gsw_dilution_coefficient_t_exact.f90
gsw_dynamic_enthalpy.f90
gsw_enthalpy.f90
gsw_enthalpy_ct_exact.f90
gsw_enthalpy_diff.f90
gsw_enthalpy_first_derivatives.f90
gsw_enthalpy_first_derivatives_ct_exact.f90
gsw_enthalpy_ice.f90
gsw_enthalpy_second_derivatives.f90
gsw_enthalpy_second_derivatives_ct_exact.f90
gsw_enthalpy_sso_0.f90
gsw_enthalpy_t_exact.f90
gsw_entropy_first_derivatives.f90
gsw_entropy_from_pt.f90
gsw_entropy_from_t.f90
gsw_entropy_ice.f90
gsw_entropy_part.f90
gsw_entropy_part_zerop.f90
gsw_entropy_second_derivatives.f90
gsw_fdelta.f90
gsw_frazil_properties.f90
gsw_frazil_properties_potential.f90
gsw_frazil_properties_potential_poly.f90
gsw_frazil_ratios_adiabatic.f90
gsw_frazil_ratios_adiabatic_poly.f90
gsw_geo_strf_dyn_height.f90
gsw_geo_strf_dyn_height_pc.f90
gsw_gibbs.f90
gsw_gibbs_ice.f90
gsw_gibbs_ice_part_t.f90
gsw_gibbs_ice_pt0.f90
gsw_gibbs_ice_pt0_pt0.f90
gsw_gibbs_pt0_pt0.f90
gsw_grav.f90
gsw_helmholtz_energy_ice.f90
gsw_hill_ratio_at_sp2.f90
gsw_ice_fraction_to_freeze_seawater.f90
gsw_internal_energy.f90
gsw_internal_energy_ice.f90
gsw_ipv_vs_fnsquared_ratio.f90
gsw_kappa.f90
gsw_kappa_const_t_ice.f90
gsw_kappa_ice.f90
gsw_kappa_t_exact.f90
gsw_latentheat_evap_ct.f90
gsw_latentheat_evap_t.f90
gsw_latentheat_melting.f90
gsw_linear_interp_sa_ct.f90
gsw_melting_ice_equilibrium_sa_ct_ratio.f90
gsw_melting_ice_equilibrium_sa_ct_ratio_poly.f90
gsw_melting_ice_into_seawater.f90
gsw_melting_ice_sa_ct_ratio.f90
gsw_melting_ice_sa_ct_ratio_poly.f90
gsw_melting_seaice_equilibrium_sa_ct_ratio.f90
gsw_melting_seaice_equilibrium_sa_ct_ratio_poly.f90
gsw_melting_seaice_into_seawater.f90
gsw_melting_seaice_sa_ct_ratio.f90
gsw_melting_seaice_sa_ct_ratio_poly.f90
gsw_mlp.f90
gsw_mod_baltic_data.f90
gsw_mod_check_data.f90
gsw_mod_error_functions.f90
gsw_mod_freezing_poly_coefficients.f90
gsw_mod_gibbs_ice_coefficients.f90
gsw_mod_kinds.f90
gsw_mod_saar_data.f90
gsw_mod_sp_coefficients.f90
gsw_mod_specvol_coefficients.f90
gsw_mod_teos10_constants.f90
gsw_mod_toolbox.f90
gsw_nsquared.f90
gsw_nsquared_lowerlimit.f90
gsw_nsquared_min.f90
gsw_nsquared_min_const_t.f90
gsw_p_from_z.f90
gsw_poly_check.f90
gsw_pot_enthalpy_from_pt_ice.f90
gsw_pot_enthalpy_from_pt_ice_poly.f90
gsw_pot_enthalpy_ice_freezing.f90
gsw_pot_enthalpy_ice_freezing_first_derivatives.f90
gsw_pot_enthalpy_ice_freezing_first_derivatives_poly.f90
gsw_pot_enthalpy_ice_freezing_poly.f90
gsw_pot_rho_t_exact.f90
gsw_pot_to_insitu.f90
gsw_pressure_coefficient_ice.f90
gsw_pressure_freezing_ct.f90
gsw_pt0_cold_ice_poly.f90
gsw_pt0_from_t.f90
gsw_pt0_from_t_ice.f90
gsw_pt_first_derivatives.f90
gsw_pt_from_ct.f90
gsw_pt_from_entropy.f90
gsw_pt_from_pot_enthalpy_ice.f90
gsw_pt_from_pot_enthalpy_ice_poly.f90
gsw_pt_from_pot_enthalpy_ice_poly_dh.f90
gsw_pt_from_t.f90
gsw_pt_from_t_ice.f90
gsw_pt_second_derivatives.f90
gsw_rho.f90
gsw_rho_alpha_beta.f90
gsw_rho_alpha_beta_bsq.f90
gsw_rho_first_derivatives.f90
gsw_rho_first_derivatives_wrt_enthalpy.f90
gsw_rho_ice.f90
gsw_rho_second_derivatives.f90
gsw_rho_second_derivatives_wrt_enthalpy.f90
gsw_rho_t_exact.f90
gsw_rr68_interp_sa_ct.f90
gsw_sa_freezing_estimate.f90
gsw_sa_freezing_from_ct.f90
gsw_sa_freezing_from_ct_poly.f90
gsw_sa_freezing_from_t.f90
gsw_sa_freezing_from_t_poly.f90
gsw_sa_from_rho.f90
gsw_sa_from_sp.f90
gsw_sa_from_sp_baltic.f90
gsw_sa_from_sstar.f90
gsw_sa_p_inrange.f90
gsw_saar.f90
gsw_seaice_fraction_to_freeze_seawater.f90
gsw_sigma0.f90
gsw_sigma1.f90
gsw_sigma2.f90
gsw_sigma3.f90
gsw_sigma4.f90
gsw_sound_speed.f90
gsw_sound_speed_ice.f90
gsw_sound_speed_t_exact.f90
gsw_sp_from_c.f90
gsw_sp_from_sa.f90
gsw_sp_from_sa_baltic.f90
gsw_sp_from_sk.f90
gsw_sp_from_sr.f90
gsw_sp_from_sstar.f90
gsw_specvol.f90
gsw_specvol_alpha_beta.f90
gsw_specvol_anom_standard.f90
gsw_specvol_first_derivatives.f90
gsw_specvol_first_derivatives_wrt_enthalpy.f90
gsw_specvol_ice.f90
gsw_specvol_second_derivatives.f90
gsw_specvol_second_derivatives_wrt_enthalpy.f90
gsw_specvol_sso_0.f90
gsw_specvol_t_exact.f90
gsw_spiciness0.f90
gsw_spiciness1.f90
gsw_spiciness2.f90
gsw_sr_from_sp.f90
gsw_sstar_from_sa.f90
gsw_sstar_from_sp.f90
gsw_t_deriv_chem_potential_water_t_exact.f90
gsw_t_freezing.f90
gsw_t_freezing_exact.f90
gsw_t_freezing_first_derivatives.f90
gsw_t_freezing_first_derivatives_poly.f90
gsw_t_freezing_poly.f90
gsw_t_from_ct.f90
gsw_t_from_pt0_ice.f90
gsw_thermobaric.f90
gsw_turner_rsubrho.f90
gsw_util_indx.f90
gsw_util_interp1q_int.f90
gsw_util_xinterp1.f90
gsw_z_from_p.f90
Guillou.f90
gw_drag_b.F90
gw_drag_d.F90
gw_drag_init.F90
HBHtMatrix.h
height_variables_mod.f90
HessianMatrix.h
HMatrix.h
HofX.cc
HofX.h
horiz_interp.F90
horiz_interp_bicubic.F90
horiz_interp_bilinear.F90
horiz_interp_conserve.F90
horiz_interp_spherical.F90
horiz_interp_type.F90
HtMatrix.h
HtRinvHMatrix.h
HybridCovariance.h
Hyperbolic_Step.f90
iAtm_Define.f90
IdentityMatrix.h
IdVariableChange.h
oops/interface/Increment.h
test/interface/Increment.h
Increment4D.h
IncrementalAssimilation.h
IncrementFV3JEDI.cc
IncrementFV3JEDI.h
IncrementFV3JEDIFortran.h
src/lorenz95/IncrementL95.cc
test/lorenz95/IncrementL95.cc
IncrementL95.h
IncrementQG.cc
IncrementQG.h
init_hydro_nlm.F90
instantiateCostFactory.h
instantiateCovarFactory.h
instantiateFilterFactory.h
instantiateFV3JEDIVarChangeFactory.h
instantiateLinearVariableChangeFactory.h
fv3-jedi/src/Localization/instantiateLocalizationFactory.h
oops/l95/src/lorenz95/instantiateLocalizationFactory.h
oops/src/oops/generic/instantiateLocalizationFactory.h
instantiateMinFactory.h
instantiateModelFactory.h
instantiateObsErrorFactory.h
instantiateQgChangeVarFactory.h
instantiateQgLocalizationFactory.h
instantiateTlmFactory.h
interp.c
interp.h
interpolator.F90
InterpolatorTraj.h
invent_state.f90
invert_pv.f90
invert_pv_ad.f90
invert_pv_tl.f90
ioda_locs_mod.F90
ioda_obs_example_mod.F90
ioda_obsdb_mod.F90
ioda_obsvar_mod.F90
ioda_utils_mod.F90
IodaIO.cc
src/fileio/IodaIO.h
test/fileio/IodaIO.h
IodaIOfactory.cc
IodaIOfactory.h
IodaTrait.h
IPCG.h	Inexact-Preconditioned Conjugate Gradients solver
IPCGMinimizer.h
irrad.F90
irrad_ad.F90
irrad_tl.F90
irradconstants.F90
IRwaterCoeff_Define.f90
JqTerm.h
JqTermTLAD.h
L95Browser.py
L95Fdb.py
L95Odb.py
L95Plot.py
L95Traits.h
lag_interp.F90
laplacian_2d.f90
Large_Scale_Correction_Module.f90
LBGMRESRMinimizer.h
LBHessianMatrix.h
LBMinimizer.h
lin_cloud_microphys_nlm.F90
oops/interface/LinearModel.h
test/interface/LinearModel.h
LinearModelBase.h
LinearModelId.h
LinearObsOperator.cc
oops/src/oops/interface/LinearObsOperator.h
oops/src/test/interface/LinearObsOperator.h
ufo/src/ufo/LinearObsOperator.h
LinearObsOperatorBase.cc
LinearObsOperatorBase.h
LinearObsOperators.h
oops/interface/LinearVariableChange.h
test/interface/LinearVariableChange.h
LinearVariableChangeBase.h
Liu.f90
oops/interface/Localization.h
test/interface/Localization.h
LocalizationBase.h
LocalizationBUMP.h
LocalizationMatrixFV3JEDI.cc
LocalizationMatrixFV3JEDI.h
LocalizationMatrixFV3JEDIFortran.h
src/lorenz95/LocalizationMatrixL95.cc
test/lorenz95/LocalizationMatrixL95.cc
LocalizationMatrixL95.h
LocalizationMatrixQG.cc
LocalizationMatrixQG.h
Locations.cc
ioda/src/ioda/Locations.h
oops/src/oops/interface/Locations.h
oops/src/test/interface/Locations.h
Locations.interface.F90
LocationsQG.cc
LocationsQG.h
src/lorenz95/LocsL95.cc
test/lorenz95/LocsL95.cc
LocsL95.h
lorenz95NamespaceDoc.h
LSEatlas_Define.f90
m_diag_aircft.f90
m_diag_conv.f90
m_diag_marine_conv_mod.F90
m_diag_raob.f90
m_distribution.f90
Main4dvar.cc
mainpage.h
make_check_data.py
make_saar_data.py
MakeObs.cc
MakeObs.h
MAPL_Constants.F90
memuse.c
memutils.F90
meridional_wind.f90
meridional_wind_ad.f90
meridional_wind_tl.f90
MersenneTwister.F90
Message_Handler.f90
MieInterface.F90
Minimizer.h
MINRES.h	MINRES solver for Ax=b
MINRESMinimizer.h
oops/interface/Model.h
test/interface/Model.h
oops/interface/ModelAuxControl.h
test/interface/ModelAuxControl.h
oops/interface/ModelAuxCovariance.h
test/interface/ModelAuxCovariance.h
oops/interface/ModelAuxIncrement.h
test/interface/ModelAuxIncrement.h
ModelBase.h
src/lorenz95/ModelBias.cc
test/lorenz95/ModelBias.cc
l95/src/lorenz95/ModelBias.h
qg/model/ModelBias.h
src/lorenz95/ModelBiasCorrection.cc
test/lorenz95/ModelBiasCorrection.cc
ModelBiasCorrection.h
src/lorenz95/ModelBiasCovariance.cc
test/lorenz95/ModelBiasCovariance.cc
l95/src/lorenz95/ModelBiasCovariance.h
qg/model/ModelBiasCovariance.h
ModelBiasCovarianceFV3JEDI.h
ModelBiasFV3JEDI.h
ModelBiasIncrement.h
ModelBiasIncrementFV3JEDI.h
ModelFactory.py
ModelFV3JEDI.cc
ModelFV3JEDI.h
ModelFV3JEDIFortran.h
src/lorenz95/ModelL95.cc
test/lorenz95/ModelL95.cc
ModelL95.h
ModelQG.cc
ModelQG.h
ModelSpaceCovarianceBase.h
ModelTrajectory.cc
ModelTrajectory.h
moisture_variables_mod.f90
monin_obukhov.F90
monin_obukhov_interfaces.h
monin_obukhov_kernel.F90
mosaic.F90
mosaic_util.c
mosaic_util.h
mpi.cc
mpi.h
mpp.F90
mpp_alltoall_mpi.h
mpp_alltoall_nocomm.h
mpp_alltoall_sma.h
mpp_chksum.h
mpp_chksum_int.h
mpp_chksum_scalar.h
mpp_comm.inc
mpp_comm_mpi.inc
mpp_comm_nocomm.inc
mpp_comm_sma.inc
mpp_data.F90
mpp_data_mpi.inc
mpp_data_nocomm.inc
mpp_data_sma.inc
mpp_define_nest_domains.inc
mpp_do_check.h
mpp_do_checkV.h
mpp_do_get_boundary.h
mpp_do_get_boundary_ad.h
mpp_do_global_field.h
mpp_do_global_field_ad.h
mpp_do_redistribute.h
mpp_do_update.h
mpp_do_update_ad.h
mpp_do_update_nest.h
mpp_do_update_nonblock.h
mpp_do_updateV.h
mpp_do_updateV_ad.h
mpp_do_updateV_nonblock.h
mpp_domains.F90
mpp_domains_comm.inc
mpp_domains_define.inc
mpp_domains_misc.inc
mpp_domains_reduce.inc
mpp_domains_util.inc
mpp_efp.F90
mpp_error_a_a.h
mpp_error_a_s.h
mpp_error_s_a.h
mpp_error_s_s.h
mpp_gather.h
mpp_get_boundary.h
mpp_get_boundary_ad.h
mpp_global_field.h
mpp_global_field_ad.h
mpp_global_field_ug.h
mpp_global_reduce.h
mpp_global_sum.h
mpp_global_sum_ad.h
mpp_global_sum_tl.h
mpp_group_update.h
mpp_io.F90
mpp_io_connect.inc
mpp_io_misc.inc
mpp_io_read.inc
mpp_io_unstructured_read.inc
mpp_io_unstructured_write.inc
mpp_io_util.inc
mpp_io_write.inc
mpp_memutils.F90
mpp_parameter.F90
mpp_pset.F90
mpp_read_2Ddecomp.h
mpp_read_compressed.h
mpp_read_distributed_ascii.h
mpp_read_distributed_ascii.inc
mpp_reduce_mpi.h
mpp_reduce_nocomm.h
mpp_reduce_sma.h
mpp_scatter.h
mpp_sum.inc
mpp_sum_ad.inc
mpp_sum_mpi.h
mpp_sum_mpi_ad.h
mpp_sum_nocomm.h
mpp_sum_sma.h
mpp_transmit.inc
mpp_transmit_mpi.h
mpp_transmit_nocomm.h
mpp_transmit_sma.h
mpp_type_mpi.h
mpp_type_nocomm.h
mpp_type_sma.h
mpp_unstruct_domain.inc
mpp_unstruct_pass_data.h
mpp_update_domains2D.h
mpp_update_domains2D_ad.h
mpp_update_domains2D_nonblock.h
mpp_update_nest_domains.h
mpp_util.inc
mpp_util_mpi.inc
mpp_util_nocomm.inc
mpp_util_sma.inc
mpp_utilities.F90
mpp_write.h
mpp_write_2Ddecomp.h
mpp_write_compressed.h
mpp_write_unlimited_axis.h
MWwaterCoeff_Define.f90
MWwaterLUT_Define.f90
nc_diag_cat.F90
nc_diag_read_mod.F90
nc_diag_res.f90
nc_diag_write_mod.F90
ncd_kinds.F90
ncdc_cli_process.F90
ncdc_climsg.F90
ncdc_data.F90
ncdc_dims.F90
ncdc_metadata.F90
ncdc_realloc.F90
ncdc_state.F90
ncdc_types.f90
ncdc_vars.F90
ncdf_path_m.f90
ncdf_string_m.f90
ncdf_value_m.f90
ncdr_alloc_assert.f90
ncdr_attrs.f90
ncdr_attrs_fetch.f90
ncdr_check.f90
ncdr_climsg.F90
ncdr_dims.f90
ncdr_global_attrs.f90
ncdr_global_attrs_fetch.f90
ncdr_realloc_mod.F90
ncdr_state.f90
ncdr_types.f90
ncdr_vars.f90
ncdr_vars_fetch.f90
ncdres_climsg.F90
ncdw_chaninfo.F90
ncdw_ciresize.F90
ncdw_climsg.F90
ncdw_data2d.F90
ncdw_dresize.F90
ncdw_lheader.F90
ncdw_metadata.F90
ncdw_mresize.F90
ncdw_realloc.F90
ncdw_state.f90
ncdw_strarrutils.F90
ncdw_types.F90
ncdw_varattr.F90
ncutils.F90
NESDIS_AMSRE_SICEEM_Module.f90
NESDIS_AMSRE_SNOWEM_Module.f90
NESDIS_AMSU_SICEEM_Module.f90
NESDIS_AMSU_SnowEM_Module.f90
NESDIS_ATMS_SnowEM_Module.f90
NESDIS_LandEM_Module.f90
NESDIS_MHS_SICEEM_Module.f90
NESDIS_MHS_SnowEM_Module.f90
NESDIS_SEAICE_PHYEM_MODULE.f90
NESDIS_SnowEM_ATMS_Parameters.f90
NESDIS_SnowEM_Parameters.f90
NESDIS_SSMI_Module.f90
NESDIS_SSMI_SIceEM_Module.f90
NESDIS_SSMI_SnowEM_Module.f90
NESDIS_SSMIS_SeaIceEM_Module.f90
NESDIS_SSMIS_SnowEM_Module.f90
netcdf_to_odb.F90
netcdf_to_odb2.F90
netcdf_unlimdims.F90
NetcdfIO.cc
NetcdfIO.h
nh_core_adm.F90
nh_core_nlm.F90
nh_core_tlm.F90
nh_utils_adm.F90
nh_utils_nlm.F90
nh_utils_tlm.F90
NLTE_Parameters.f90
NLTE_Predictor_Define.f90
NLTE_Predictor_IO.f90
NLTECoeff_Binary_IO.f90
NLTECoeff_Define.f90
l95/src/lorenz95/Nothing.h
qg/model/Nothing.h
nsclock.c
nwp_nudge_nlm.F90
ObsADT.cc
ObsADT.h
ObsADTTLAD.cc
ObsADTTLAD.h
ObsAircraft.cc
ObsAircraft.h
ObsAircraftTLAD.cc
ObsAircraftTLAD.h
ObsAod.cc
ObsAod.h
ObsAodTLAD.cc
ObsAodTLAD.h
oops/interface/ObsAuxControl.h
test/interface/ObsAuxControl.h
oops/interface/ObsAuxCovariance.h
test/interface/ObsAuxCovariance.h
oops/interface/ObsAuxIncrement.h
test/interface/ObsAuxIncrement.h
l95/src/lorenz95/ObsBias.cc
l95/test/lorenz95/ObsBias.cc
qg/model/ObsBias.cc
oops/l95/src/lorenz95/ObsBias.h
oops/qg/model/ObsBias.h
ufo/src/ufo/ObsBias.h
src/lorenz95/ObsBiasCorrection.cc
test/lorenz95/ObsBiasCorrection.cc
ObsBiasCorrection.h
l95/src/lorenz95/ObsBiasCovariance.cc
l95/test/lorenz95/ObsBiasCovariance.cc
qg/model/ObsBiasCovariance.cc
oops/l95/src/lorenz95/ObsBiasCovariance.h
oops/qg/model/ObsBiasCovariance.h
ufo/src/ufo/ObsBiasCovariance.h
ObsBiasIncrement.cc
oops/qg/model/ObsBiasIncrement.h
ufo/src/ufo/ObsBiasIncrement.h
ObsCheck.cc
oops/src/oops/interface/ObsCheck.h
oops/src/test/interface/ObsCheck.h
ufo/src/ufo/ObsCheck.h
ObsEnsemble.h
ObsErrorBase.h
oops/interface/ObsErrorCovariance.h
test/interface/ObsErrorCovariance.h
ObsErrorDiag.h
ObsErrors.h
src/lorenz95/ObservationL95.cc
test/lorenz95/ObservationL95.cc
ObservationL95.h
Observations.h
oops/interface/ObservationSpace.h
test/interface/ObservationSpace.h
ObservationTLAD.cc
ObservationTLAD.h
Observer.h
ObserverTLAD.h
ObsFilter.h
ObsFilters.h
ObsGnssroBndGSI.cc
ObsGnssroBndGSI.h
ObsGnssroBndROPP1D.cc
ObsGnssroBndROPP1D.h
ObsGnssroRef.cc
ObsGnssroRef.h
ObsGnssroRefTLAD.cc
ObsGnssroRefTLAD.h
ObsHelpQG.cc
ObsHelpQG.h
ObsInsituTemperature.cc
ObsInsituTemperature.h
ObsInsituTemperatureTLAD.cc
ObsInsituTemperatureTLAD.h
ObsOpBaseQG.cc
ObsOpBaseQG.h
ObsOpBaseTLAD.cc
ObsOpBaseTLAD.h
ObsOperator.cc
oops/src/oops/interface/ObsOperator.h
oops/src/test/interface/ObsOperator.h
ufo/src/ufo/ObsOperator.h
ObsOperatorBase.cc
ObsOperatorBase.h
ObsOperatorQG.cc
ObsOperatorQG.h
ObsOperators.h
ObsOperatorTLAD.cc
ObsOperatorTLAD.h
ObsRadiance.cc
ObsRadiance.h
ObsRadianceTLAD.cc
ObsRadianceTLAD.h
ObsRadiosonde.cc
ObsRadiosonde.h
ObsRadiosondeTLAD.cc
ObsRadiosondeTLAD.h
ObsSeaIceFraction.cc
ObsSeaIceFraction.h
ObsSeaIceFractionTLAD.cc
ObsSeaIceFractionTLAD.h
ObsSeaIceThickness.cc
ObsSeaIceThickness.h
ObsSeaIceThicknessTLAD.cc
ObsSeaIceThicknessTLAD.h
ObsSeaSurfaceTemp.cc
ObsSeaSurfaceTemp.h
ObsSeaSurfaceTempTLAD.cc
ObsSeaSurfaceTempTLAD.h
ObsSpace.cc
ObsSpace.Example.interface.F90
src/ioda/ObsSpace.h
test/ioda/ObsSpace.h
ObsSpace.interface.F90
obsspace_f.cc
obsspace_f.h
obsspace_interface.f
obsspace_mod.F90
ObsSpaceBase.h
ObsSpaceQG.cc
ObsSpaceQG.h
ObsSpaces.h
ObsStericHeight.cc
ObsStericHeight.h
ObsStericHeightTLAD.cc
ObsStericHeightTLAD.h
ObsStreamQG.cc
ObsStreamQG.h
ObsStreamTLAD.cc
ObsStreamTLAD.h
src/lorenz95/ObsTable.cc
test/lorenz95/ObsTable.cc
ObsTable.h
ObsTestsFixture.h
src/lorenz95/ObsVec1D.cc
test/lorenz95/ObsVec1D.cc
ObsVec1D.h
ObsVecQG.cc
ObsVecQG.h
ObsVector.cc
ioda/src/ioda/ObsVector.h
oops/src/oops/interface/ObsVector.h
oops/src/test/interface/ObsVector.h
ObsWindQG.cc
ObsWindQG.h
ObsWindTLAD.cc
ObsWindTLAD.h
ObsWSpeedQG.cc
ObsWSpeedQG.h
ObsWSpeedTLAD.cc
ObsWSpeedTLAD.h
oda_core.F90
oda_core_ecda.F90
oda_types.F90
ODAS_AtmAbsorption.f90
ODAS_Binary_IO.f90
ODAS_Define.f90
ODAS_Predictor.f90
ODAS_Predictor_Define.f90
ODAS_TauCoeff.f90
odb_helper_mod.F90
OdbApiIO.cc
OdbApiIO.h
ODPS_AtmAbsorption.f90
ODPS_Binary_IO.f90
ODPS_CoordinateMapping.f90
ODPS_Define.f90
ODPS_Predictor.f90
ODPS_Predictor_Define.f90
ODPS_TauCoeff.f90
ODSSU_AtmAbsorption.f90
ODSSU_Binary_IO.f90
ODSSU_Define.f90
ODSSU_TauCoeff.f90
ODZeeman_AtmAbsorption.f90
ODZeeman_Predictor.f90
ODZeeman_TauCoeff.f90
oobump_f.h
oobump_mod.F90
src/odb/OOPS.ddl
test/testinput/atmosphere/diag_t_obs_01_wprofiles_odb/OOPS.ddl
oopsNamespaceDoc.h
overview.h
PAFV_Define.f90
ParametersBUMP.h
parse.inc
PCG.h	Preconditioned Conjugate Gradients solver
PCGMinimizer.h
PLanczos.h	Preconditioned Lanczos solver
PLanczosMinimizer.h
platform.F90
PlotCubeSphereField.py
plotDiffs.py
plotFields.py
PlotQG.py
PostBase.h
PostBaseTLAD.h
PostProcessor.h
PostProcessorTLAD.h
PostTimer.cc
PostTimer.h
pressure_variables_mod.f90
PrimalMinimizer.h
Profile_Utility_Parameters.f90
propagate.f90
PseudoModel.h
pv_operator.f90
pv_operator_ad.f90
qg4DVar.cc
qg_bstddev_mod.F90
qg_configs.F90
qg_constants.f90
qg_covariance_mod.F90
qg_fields.F90
qg_fields_interface.F90
qg_geom_iter_mod.F90
qg_geom_mod.F90
qg_goms_mod.F90
qg_localization_matrix.f90
qg_locs_mod.F90
qg_obs_data.F90
qg_obs_vectors.F90
qg_obsoper_mod.F90
qg_stream_mod.F90
qg_trajectories.F90
qg_vars_mod.F90
qg_wind_mod.F90
qg_wspeed_mod.F90
QGBrowser.py
qgDFI.cc
qgDirac.cc
qgEnsHofX.cc
qgEstimateParams.cc
QGFdb.py
qgForecast.cc
QgFortran.h
qgGenEnsPertB.cc
qgHofX.cc
qgMakeObs.cc
qgNamespaceDoc.h
QGOdb.py
QgPlot.py
QgRead.py
qgStaticBInit.cc
QgTraits.h
QNewtonLMP.h
qsat_util.F90
quicksort.F90
radconstants.F90
ioda/src/ioda/random_f.cc
oops/qg/model/random_f.cc
ioda/src/ioda/random_f.h
oops/qg/model/random_f.h
random_numbers.F90
fv3-jedi/src/Utilities/random_vectors_mod.f90
ioda/src/ioda/random_vectors_mod.f90
oops/qg/model/random_vectors_mod.f90
read_aod_diag.f90
read_climate_nudge_data_nlm.F90
read_data_2d.inc
read_data_3d.inc
read_data_4d.inc
read_diag.f90
read_mosaic.c
read_mosaic.h
ReadQG.py
Reflection_Correction_Module.f90
src/lorenz95/Resolution.cc
test/lorenz95/Resolution.cc
Resolution.h
RinvMatrix.h
rotmat.h	Compute the Givens rotation matrix parameters
RPCGMinimizer.h
RPLanczosMinimizer.h
RTV_Define.f90
Run.cc
Run.h
RunCRTM.h
RunFV3JEDI.cc
RunFV3JEDI.h
RunFV3JEDIFortran.h
SaddlePointLMPMatrix.h
SaddlePointMatrix.h
SaddlePointMinimizer.h
SaddlePointPrecondMatrix.h
SaddlePointVector.h
sat_vapor_pres.F90
sat_vapor_pres_k.F90
Search_Utility.f90
SEcategory_Define.f90
SensorInfo_Parameters.f90
sim_nc_nlm_mod.F90
Slope_Variance.f90
Small_Scale_Correction_Module.f90
SOI_Module.f90
solve_elliptic_system.f90
solve_helmholz.f90
sorad.F90
sorad_ad.F90
sorad_tl.F90
soradconstants.F90
Sort_Utility.f90
sorted_index_nlm.F90
SpcCoeff_Binary_IO.f90
SpcCoeff_Define.f90
Spectral_Units_Conversion.f90
SpectralLMP.h
SSU_Input_Define.f90
oops/interface/State.h
test/interface/State.h
State4D.h
StateEnsemble.h
StateFV3JEDI.cc
StateFV3JEDI.h
StateFV3JEDIFortran.h
StateInfo.h
src/lorenz95/StateL95.cc
test/lorenz95/StateL95.cc
StateL95.h
StateQG.cc
StateQG.h
StateWriter.h
StaticBInit.h
station_data.F90
StatsVariableChange.h
stock_constants.F90
String_Utility.f90
Subset_Define.f90
surface_variables_mod.f90
sw_core_adm.F90
sw_core_nlm.F90
sw_core_tlm.F90
system_clock.h
tapenade_iter.F90
TauCoeff_Define.f90
temperature_variables_mod.f90
Test.h
test_cases_nlm.F90
test_fms_io.F90
test_horiz_interp.F90
test_main.cc
test_mpp.F90
test_mpp_domains.F90
test_mpp_io.F90
test_mpp_pset.F90
test_nc_unlimdims.F90
test_unstructured_fms_io.F90
test_xgrid.F90
TestConfig.h
TestEnvironment.h
fv3-jedi/test/executables/TestErrorCovariance.cc
oops/l95/test/executables/TestErrorCovariance.cc
oops/qg/test/executables/TestErrorCovariance.cc
TestFixture.h
fv3-jedi/test/executables/TestGeometry.cc
oops/l95/test/executables/TestGeometry.cc
oops/qg/test/executables/TestGeometry.cc
TestGeometryIterator.cc
oops/l95/test/executables/TestGeoVaLs.cc
oops/qg/test/executables/TestGeoVaLs.cc
ufo/test/mains/TestGeoVaLs.cc
fv3-jedi/test/executables/TestIncrement.cc
oops/l95/test/executables/TestIncrement.cc
oops/qg/test/executables/TestIncrement.cc
TestIodaIO.cc
fv3-jedi/test/executables/TestLinearModel.cc
oops/l95/test/executables/TestLinearModel.cc
oops/qg/test/executables/TestLinearModel.cc
fv3-jedi/test/executables/TestLinearObsOperator.cc
oops/l95/test/executables/TestLinearObsOperator.cc
oops/qg/test/executables/TestLinearObsOperator.cc
TestLinearVariableChange.cc
fv3-jedi/test/executables/TestLocalization.cc
oops/l95/test/executables/TestLocalization.cc
oops/qg/test/executables/TestLocalization.cc
ioda/test/mains/TestLocations.cc
oops/qg/test/executables/TestLocations.cc
fv3-jedi/test/executables/TestModel.cc
oops/l95/test/executables/TestModel.cc
oops/qg/test/executables/TestModel.cc
fv3-jedi/test/executables/TestModelAuxControl.cc
oops/l95/test/executables/TestModelAuxControl.cc
oops/qg/test/executables/TestModelAuxControl.cc
fv3-jedi/test/executables/TestModelAuxCovariance.cc
oops/l95/test/executables/TestModelAuxCovariance.cc
oops/qg/test/executables/TestModelAuxCovariance.cc
fv3-jedi/test/executables/TestModelAuxIncrement.cc
oops/l95/test/executables/TestModelAuxIncrement.cc
oops/qg/test/executables/TestModelAuxIncrement.cc
fv3-jedi/test/executables/TestModelIncrement.cc
oops/l95/test/executables/TestModelIncrement.cc
oops/qg/test/executables/TestModelIncrement.cc
l95/test/executables/TestObsAuxControl.cc
qg/test/executables/TestObsAuxControl.cc
l95/test/executables/TestObsAuxCovariance.cc
qg/test/executables/TestObsAuxCovariance.cc
l95/test/executables/TestObsAuxIncrement.cc
qg/test/executables/TestObsAuxIncrement.cc
TestObsCheck.cc
l95/test/executables/TestObsErrorCovariance.cc
qg/test/executables/TestObsErrorCovariance.cc
ioda/test/mains/TestObservationSpace.cc
oops/l95/test/executables/TestObservationSpace.cc
oops/qg/test/executables/TestObservationSpace.cc
oops/l95/test/executables/TestObsOperator.cc
oops/qg/test/executables/TestObsOperator.cc
ufo/test/mains/TestObsOperator.cc
TestObsOperatorTLAD.cc
TestObsSpace.cc
ioda/test/mains/TestObsVector.cc
oops/l95/test/executables/TestObsVector.cc
oops/qg/test/executables/TestObsVector.cc
fv3-jedi/test/executables/TestState.cc
oops/l95/test/executables/TestState.cc
oops/qg/test/executables/TestState.cc
TestVariableChange.cc
threadloc.c
time_interp.F90
time_interp_external.F90
time_manager.F90
Timing_Utility.f90
TLM_vs_NLM.py
TlmFV3JEDI.cc
TlmFV3JEDI.h
TlmFV3JEDIFortran.h
TlmIdFV3JEDI.cc
TlmIdFV3JEDI.h
TlmIdQG.cc
TlmIdQG.h
src/lorenz95/TLML95.cc
test/lorenz95/TLML95.cc
TLML95.h
TlmQG.cc
TlmQG.h
tools_asa007.F90
tools_const.F90
tools_fit.F90
tools_func.F90
tools_kdtree2.F90
tools_kdtree2_pq.F90
tools_kinds.F90
tools_missing.F90
tools_nc.F90
tools_qsort.F90
tools_repro.F90
tools_stripack.F90
topography.F90
tp_core_adm.F90
tp_core_nlm.F90
tp_core_tlm.F90
tracer_manager.F90
TrajectorySaver.h
tridiagonal.F90
TriDiagSolve.h
TriDiagSpectrum.h
type_avg.F90
type_avg_blk.F90
type_bpar.F90
type_bump.F90
type_cmat.F90
type_cmat_blk.F90
type_com.F90
type_cv.F90
type_cv_blk.F90
type_diag.F90
type_diag_blk.F90
type_displ.F90
type_ens.F90
type_geom.F90
type_hdiag.F90
type_io.F90
type_kdtree.F90
Type_Kinds.f90
type_lct.F90
type_lct_blk.F90
type_linop.F90
type_mesh.F90
type_minim.F90
type_mom.F90
type_mom_blk.F90
type_mpl.F90
type_nam.F90
type_nicas.F90
type_nicas_blk.F90
type_obsop.F90
type_rng.F90
type_samp.F90
type_vbal.F90
type_vbal_blk.F90
ufo_adt_interface.F90
ufo_adt_mod.F90
ufo_adt_tlad_interface.F90
ufo_adt_tlad_mod.F90
ufo_aircraft_interface.F90
ufo_aircraft_mod.F90
ufo_aircraft_tlad_interface.F90
ufo_aircraft_tlad_mod.F90
ufo_aod_interface.F90
ufo_aod_misc.F90
ufo_aod_mod.F90
ufo_aod_tlad_interface.F90
ufo_aod_tlad_mod.F90
ufo_basis_mod.F90
ufo_basis_tlad_mod.F90
ufo_conventional_profile_mod.F90
ufo_conventional_profile_tlad_mod.F90
ufo_geovals_interface.F90
ufo_geovals_mod.F90
ufo_gnssro_bndgsi_interface.F90
ufo_gnssro_bndgsi_mod.F90
ufo_gnssro_bndropp1d_interface.F90
ufo_gnssro_bndropp1d_mod.F90
ufo_gnssro_ref_interface.F90
ufo_gnssro_ref_mod.F90
ufo_gnssro_ref_tlad_interface.F90
ufo_gnssro_ref_tlad_mod.F90
ufo_insitutemperature_interface.F90
ufo_insitutemperature_mod.F90
ufo_insitutemperature_tlad_interface.F90
ufo_insitutemperature_tlad_mod.F90
ufo_obscheck_mod.F90
ufo_radiance_interface.F90
ufo_radiance_mod.F90
ufo_radiance_tlad_interface.F90
ufo_radiance_tlad_mod.F90
ufo_radiance_utils_mod.F90
ufo_radiosonde_interface.F90
ufo_radiosonde_mod.F90
ufo_radiosonde_tlad_interface.F90
ufo_radiosonde_tlad_mod.F90
ufo_seaicefrac_interface.F90
ufo_seaicefrac_mod.F90
ufo_seaicefrac_tlad_interface.F90
ufo_seaicefrac_tlad_mod.F90
ufo_seaicethick_interface.F90
ufo_seaicethick_mod.F90
ufo_seaicethick_tlad_interface.F90
ufo_seaicethick_tlad_mod.F90
ufo_seasurfacetemp_interface.F90
ufo_seasurfacetemp_mod.F90
ufo_seasurfacetemp_tlad_interface.F90
ufo_seasurfacetemp_tlad_mod.F90
ufo_steric.F90
ufo_stericheight_interface.F90
ufo_stericheight_mod.F90
ufo_stericheight_tlad_interface.F90
ufo_stericheight_tlad_mod.F90
ufo_tpsp2ti_mod.F90
ufo_variables_mod.F90
ufoRunCRTM.cc
UfoTrait.h
UnitTest_Define.f90
unstructured_grid_f.h
unstructured_grid_mod.F90
UnstructuredGrid.cc
UnstructuredGrid.h
UpHessSolve.h
UpTriSolve.h	Solves the upper triangular system sol = H \ rhs
ut_ncmass.F90
ut_ncrad.F90
UtilitiesFV3JEDI.cc
UtilitiesFV3JEDI.h
VarChaC2MFV3JEDI.cc
VarChaC2MFV3JEDI.h
VarChaC2MFV3JEDIFortran.h
oops/base/Variables.cc
test/base/Variables.cc
Variables.h
VariablesQG.cc
VariablesQG.h
Variational.h
vert_interp.F90
WeightedDiff.h
WeightedDiffTLAD.h
WeightedMean.h
WeightingFct.cc
WeightingFct.h
wind_variables_mod.f90
write_data.inc
write_ocean_data.F90
xbt_drop_rate_adjust.f90
xgrid.F90
Zeeman_Input_Define.f90
Zeeman_Utility.f90
zonal_wind.f90
zonal_wind_ad.f90
zonal_wind_tl.f90