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mpp_do_global_field_ad.h
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1 ! -*-f90-*-
2 
3 
4 !***********************************************************************
5 !* GNU Lesser General Public License
6 !*
7 !* This file is part of the GFDL Flexible Modeling System (FMS).
8 !*
9 !* FMS is free software: you can redistribute it and/or modify it under
10 !* the terms of the GNU Lesser General Public License as published by
11 !* the Free Software Foundation, either version 3 of the License, or (at
12 !* your option) any later version.
13 !*
14 !* FMS is distributed in the hope that it will be useful, but WITHOUT
15 !* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
16 !* FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
17 !* for more details.
18 !*
19 !* You should have received a copy of the GNU Lesser General Public
20 !* License along with FMS. If not, see <http://www.gnu.org/licenses/>.
21 !***********************************************************************
22 
23  subroutine MPP_DO_GLOBAL_FIELD_3D_AD_( domain, local, global, tile, ishift, jshift, flags, default_data)
24 !get a global field from a local field
25 !local field may be on compute OR data domain
26  type(domain2D), intent(in) :: domain
27  MPP_TYPE_, intent(inout) :: local(:,:,:)
28  integer, intent(in) :: tile, ishift, jshift
29  MPP_TYPE_, intent(in) :: global(domain%x(tile)%global%begin:,domain%y(tile)%global%begin:,:)
30  integer, intent(in), optional :: flags
31  MPP_TYPE_, intent(in), optional :: default_data
32  integer :: i, j, k, m, n, nd, nwords, lpos, rpos, ioff, joff, from_pe, root_pe, tile_id
33  integer :: ke, isc, iec, jsc, jec, is, ie, js, je, nword_me
34  integer :: ipos, jpos
35  logical :: xonly, yonly, root_only, global_on_this_pe
36  MPP_TYPE_ :: clocal ((domain%x(1)%compute%size+ishift) *(domain%y(1)%compute%size+jshift) *size(local,3))
37  MPP_TYPE_ :: cremote((domain%x(1)%compute%max_size+ishift)*(domain%y(1)%compute%max_size+jshift)*size(local,3))
38  integer :: stackuse
39  character(len=8) :: text
40 
41  pointer( ptr_local, clocal )
42  pointer( ptr_remote, cremote )
43 
44  stackuse = size(clocal(:))+size(cremote(:))
45  if( stackuse.GT.mpp_domains_stack_size )then
46  write( text, '(i8)' )stackuse
47  call mpp_error( FATAL, &
48  'MPP_DO_GLOBAL_FIELD user stack overflow: call mpp_domains_set_stack_size('//trim(text)//') from all PEs.' )
49  end if
51 
52  ptr_local = LOC(mpp_domains_stack)
53  ptr_remote = LOC(mpp_domains_stack(size(clocal(:))+1))
54 
55  if( .NOT.module_is_initialized )call mpp_error( FATAL, 'MPP_GLOBAL_FIELD: must first call mpp_domains_init.' )
56 
57  xonly = .FALSE.
58  yonly = .FALSE.
59  root_only = .FALSE.
60  if( PRESENT(flags) ) then
61  xonly = BTEST(flags,EAST)
62  yonly = BTEST(flags,SOUTH)
63  if( .NOT.xonly .AND. .NOT.yonly )call mpp_error( WARNING, &
64  'MPP_GLOBAL_FIELD: you must have flags=XUPDATE, YUPDATE or XUPDATE+YUPDATE' )
65  if(xonly .AND. yonly) then
66  xonly = .false.; yonly = .false.
67  endif
68  root_only = BTEST(flags, ROOT_GLOBAL)
69  if( (xonly .or. yonly) .AND. root_only ) then
70  call mpp_error( WARNING, 'MPP_GLOBAL_FIELD: flags = XUPDATE+GLOBAL_ROOT_ONLY or ' // &
71  'flags = YUPDATE+GLOBAL_ROOT_ONLY is not supported, will ignore GLOBAL_ROOT_ONLY' )
72  root_only = .FALSE.
73  endif
74  endif
75 
76  global_on_this_pe = .NOT. root_only .OR. domain%pe == domain%tile_root_pe
77  ipos = 0; jpos = 0
78  if(global_on_this_pe ) then
79  if(size(local,3).NE.size(global,3) ) call mpp_error( FATAL, &
80  'MPP_GLOBAL_FIELD: mismatch of third dimension size of global and local')
81  if( size(global,1).NE.(domain%x(tile)%global%size+ishift) .OR. size(global,2).NE.(domain%y(tile)%global%size+jshift))then
82  if(xonly) then
83  if(size(global,1).NE.(domain%x(tile)%global%size+ishift) .OR. &
84  size(global,2).NE.(domain%y(tile)%compute%size+jshift)) &
85  call mpp_error( FATAL, 'MPP_GLOBAL_FIELD: incoming arrays do not match domain for xonly global field.' )
86  jpos = -domain%y(tile)%compute%begin + 1
87  else if(yonly) then
88  if(size(global,1).NE.(domain%x(tile)%compute%size+ishift) .OR. &
89  size(global,2).NE.(domain%y(tile)%global%size+jshift)) &
90  call mpp_error( FATAL, 'MPP_GLOBAL_FIELD: incoming arrays do not match domain for yonly global field.' )
91  ipos = -domain%x(tile)%compute%begin + 1
92  else
93  call mpp_error( FATAL, 'MPP_GLOBAL_FIELD: incoming arrays do not match domain.' )
94  endif
95  endif
96  endif
97 
98  if( size(local,1).EQ.(domain%x(tile)%compute%size+ishift) .AND. size(local,2).EQ.(domain%y(tile)%compute%size+jshift) )then
99  !local is on compute domain
100  ioff = -domain%x(tile)%compute%begin + 1
101  joff = -domain%y(tile)%compute%begin + 1
102  else if( size(local,1).EQ.(domain%x(tile)%memory%size+ishift) .AND. size(local,2).EQ.(domain%y(tile)%memory%size+jshift) )then
103  !local is on data domain
104  ioff = -domain%x(tile)%data%begin + 1
105  joff = -domain%y(tile)%data%begin + 1
106  else
107  call mpp_error( FATAL, 'MPP_GLOBAL_FIELD_: incoming field array must match either compute domain or memory domain.' )
108  end if
109 
110  ke = size(local,3)
111  isc = domain%x(tile)%compute%begin; iec = domain%x(tile)%compute%end+ishift
112  jsc = domain%y(tile)%compute%begin; jec = domain%y(tile)%compute%end+jshift
113 
114  nword_me = (iec-isc+1)*(jec-jsc+1)*ke
115 
116 ! make contiguous array from compute domain
117  m = 0
118 
119 ! if there is more than one tile on this pe, then no decomposition for all tiles on this pe, so we can just return
120  if(size(domain%x(:))>1) then
121  !--- the following is needed to avoid deadlock.
122  if( tile == size(domain%x(:)) ) call mpp_sync_self( )
123  return
124  end if
125 
126  root_pe = mpp_root_pe()
127 
128 !fill off-domains (note loops begin at an offset of 1)
129  if( xonly )then
130  nd = size(domain%x(1)%list(:))
131  do n = 1,nd-1
132  lpos = mod(domain%x(1)%pos+nd-n,nd)
133  rpos = mod(domain%x(1)%pos +n,nd)
134  from_pe = domain%x(1)%list(rpos)%pe
135  rpos = from_pe - root_pe ! for concurrent run, root_pe may not be 0.
136  nwords = (domain%list(rpos)%x(1)%compute%size+ishift) * (domain%list(rpos)%y(1)%compute%size+jshift) * ke
137  ! Force use of scalar, integer ptr interface
138  m = 0
139  is = domain%list(rpos)%x(1)%compute%begin; ie = domain%list(rpos)%x(1)%compute%end+ishift
140  do k = 1, ke
141  do j = jsc, jec
142  do i = is, ie
143  m = m + 1
144  cremote(m) = global(i,j+jpos,k)
145  end do
146  end do
147  end do
148 
149  call mpp_transmit( put_data=cremote(1), plen=nwords, to_pe=from_pe, &
150  get_data=clocal(1), glen=nword_me, from_pe=domain%x(1)%list(lpos)%pe )
151 
152  call mpp_sync_self() !-ensure MPI_ISEND is done.
153  end do
154  else if( yonly )then
155  nd = size(domain%y(1)%list(:))
156  do n = 1,nd-1
157  lpos = mod(domain%y(1)%pos+nd-n,nd)
158  rpos = mod(domain%y(1)%pos +n,nd)
159  from_pe = domain%y(1)%list(rpos)%pe
160  rpos = from_pe - root_pe
161  nwords = (domain%list(rpos)%x(1)%compute%size+ishift) &
162  * (domain%list(rpos)%y(1)%compute%size+jshift) * ke
163  ! Force use of scalar, integer pointer interface
164  m = 0
165  js = domain%list(rpos)%y(1)%compute%begin; je = domain%list(rpos)%y(1)%compute%end+jshift
166  do k = 1,ke
167  do j = js, je
168  do i = isc, iec
169  m = m + 1
170  cremote(m) = global(i+ipos,j,k)
171  end do
172  end do
173  end do
174 
175  call mpp_transmit( put_data=cremote(1), plen=nwords, to_pe=from_pe, &
176  get_data=clocal(1), glen=nword_me, from_pe=domain%y(1)%list(lpos)%pe )
177 
178  call mpp_sync_self() !-ensure MPI_ISEND is done.
179  end do
180  else
181  tile_id = domain%tile_id(1)
182  nd = size(domain%list(:))
183  if(root_only) then
184  if(domain%pe .NE. domain%tile_root_pe) then
185  call mpp_recv( clocal(1), glen=nwords, from_pe=domain%tile_root_pe, tag=COMM_TAG_1 )
186  else
187  do n = 1,nd-1
188  rpos = mod(domain%pos+n,nd)
189  if( domain%list(rpos)%tile_id(1) .NE. tile_id ) cycle
190  nwords = (domain%list(rpos)%x(1)%compute%size+ishift) * (domain%list(rpos)%y(1)%compute%size+jshift) * ke
191  m = 0
192  is = domain%list(rpos)%x(1)%compute%begin; ie = domain%list(rpos)%x(1)%compute%end+ishift
193  js = domain%list(rpos)%y(1)%compute%begin; je = domain%list(rpos)%y(1)%compute%end+jshift
194 
195  do k = 1,ke
196  do j = js, je
197  do i = is, ie
198  m = m + 1
199  cremote(m) = global(i,j,k)
200  end do
201  end do
202  end do
203 
204  call mpp_send(cremote(1), plen=nword_me, to_pe=domain%list(rpos)%pe, tag=COMM_TAG_1 )
205 
206  end do
207  endif
208  else
209  do n = 1,nd-1
210  rpos = mod(domain%pos+n,nd)
211  if( domain%list(rpos)%tile_id(1) .NE. tile_id ) cycle ! global field only within tile
212  nwords = (domain%list(rpos)%x(1)%compute%size+ishift) * (domain%list(rpos)%y(1)%compute%size+jshift) * ke
213  m = 0
214  is = domain%list(rpos)%x(1)%compute%begin; ie = domain%list(rpos)%x(1)%compute%end+ishift
215  js = domain%list(rpos)%y(1)%compute%begin; je = domain%list(rpos)%y(1)%compute%end+jshift
216 
217  do k = 1,ke
218  do j = js, je
219  do i = is, ie
220  m = m + 1
221  cremote(m) = global(i,j,k)
222  end do
223  end do
224  end do
225 
226  call mpp_send( cremote(1), plen=nwords, to_pe=domain%list(rpos)%pe, tag=COMM_TAG_2 )
227 
228  end do
229 
230  do n = 1,nd-1
231  lpos = mod(domain%pos+nd-n,nd)
232  if( domain%list(lpos)%tile_id(1).NE. tile_id ) cycle ! global field only within tile
233  call mpp_recv( clocal(1), glen=nword_me, from_pe=domain%list(lpos)%pe, tag=COMM_TAG_2 )
234  end do
235 
236 
237  endif
238  end if
239 
240  call mpp_sync_self()
241 
242  ! make contiguous array from compute domain
243  m = 0
244 #ifdef LOGICAL_VARIABLE
245  local = .false.
246 #else
247  local = 0
248 #endif
249  if(global_on_this_pe) then
250  do k = 1, ke
251  do j = jsc, jec
252  do i = isc, iec
253  m = m + 1
254  clocal(m) = global(i+ipos,j+jpos,k) !always fill local domain directly
255  local(i+ioff,j+joff,k) = clocal(m)
256  end do
257  end do
258  end do
259  else
260  do k = 1, ke
261  do j = jsc, jec
262  do i = isc, iec
263  m = m + 1
264  local(i+ioff,j+joff,k) = clocal(m)
265  end do
266  end do
267  end do
268  endif
269 
270  return
271  end subroutine MPP_DO_GLOBAL_FIELD_3D_AD_
integer mpp_domains_stack_hwm
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT get_len end if return end subroutine MPP_TRANSMIT_ ! MPP_BROADCAST ! subroutine but that doesn t allow !broadcast to a subset of PEs This version will
type(ext_fieldtype), dimension(:), pointer, save, private field
*f90 *************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************subroutine MPP_UPDATE_NEST_FINE_2D_(field, nest_domain, wbuffer, ebuffer, sbuffer, nbuffer, &flags, complete, position, extra_halo, name, tile_count) MPP_TYPE_, intent(in) ::field(:,:) type(nest_domain_type), intent(inout) ::nest_domain MPP_TYPE_, intent(inout) ::wbuffer(:,:) MPP_TYPE_, intent(inout) ::ebuffer(:,:) MPP_TYPE_, intent(inout) ::sbuffer(:,:) MPP_TYPE_, intent(inout) ::nbuffer(:,:) integer, intent(in), optional ::flags logical, intent(in), optional ::complete integer, intent(in), optional ::position integer, intent(in), optional ::extra_halo character(len= *), intent(in), optional ::name integer, intent(in), optional ::tile_count MPP_TYPE_ ::field3D(size(field, 1), size(field, 2), 1) MPP_TYPE_ ::wbuffer3D(size(wbuffer, 1), size(wbuffer, 2), 1) MPP_TYPE_ ::ebuffer3D(size(ebuffer, 1), size(ebuffer, 2), 1) MPP_TYPE_ ::sbuffer3D(size(sbuffer, 1), size(sbuffer, 2), 1) MPP_TYPE_ ::nbuffer3D(size(nbuffer, 1), size(nbuffer, 2), 1) pointer(ptr, field3D) pointer(ptr_w, wbuffer3D) pointer(ptr_e, ebuffer3D) pointer(ptr_s, sbuffer3D) pointer(ptr_n, nbuffer3D) ptr=LOC(field) ptr_w=LOC(wbuffer) ptr_e=LOC(ebuffer) ptr_s=LOC(sbuffer) ptr_n=LOC(nbuffer) call mpp_update_nest_fine(field3D, nest_domain, wbuffer3D, ebuffer3D, sbuffer3D, nbuffer3D, &flags, complete, position, extra_halo, name, tile_count) returnend subroutine MPP_UPDATE_NEST_FINE_2D_subroutine MPP_UPDATE_NEST_FINE_3D_(field, nest_domain, wbuffer, sbuffer, ebuffer, nbuffer, &flags, complete, position, extra_halo, name, tile_count) MPP_TYPE_, intent(in) ::field(:,:,:) type(nest_domain_type), intent(inout) ::nest_domain MPP_TYPE_, intent(inout) ::wbuffer(:,:,:) MPP_TYPE_, intent(inout) ::ebuffer(:,:,:) MPP_TYPE_, intent(inout) ::sbuffer(:,:,:) MPP_TYPE_, intent(inout) ::nbuffer(:,:,:) integer, intent(in), optional ::flags logical, intent(in), optional ::complete integer, intent(in), optional ::position integer, intent(in), optional ::extra_halo character(len= *), intent(in), optional ::name integer, intent(in), optional ::tile_count MPP_TYPE_ ::d_type type(nestSpec), pointer ::update=> set_mismatch integer ::tile update_position nbuffersz l_size integer
l_size ! loop over number of fields ke do je do i
integer, private je
Definition: fms_io.F90:494
integer, save, private iec
Definition: oda_core.F90:124
integer, parameter, public note
integer, parameter, public no
subroutine, public copy(self, rhs)
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT end
character(len=256) text
Definition: mpp_io.F90:1051
integer(long), parameter false
from from_pe
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT get_len end if return end subroutine MPP_TRANSMIT_ ! MPP_BROADCAST ! subroutine but that doesn t allow !broadcast to a subset of PEs This version and mpp_transmit will remain !backward compatible MPP_TYPE_
l_size ! loop over number of fields ke do j
l_size ! loop over number of fields ke do je do ie to je n if(.NOT. d_comm%R_do_buf(list)) cycle from_pe
logical module_is_initialized
l_size ! loop over number of fields ke do je do ie to to_pe
integer, parameter m
character(len=128) version
l_size ! loop over number of fields ke do je do ie to is
type
Definition: c2f.py:15
integer, parameter, public global
integer, private ie
Definition: fms_io.F90:494
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call mpp_error(FATAL, 'MPP_TRANSMIT:you cannot transmit to ANY_PE using MPI.') else if(to_pe.NE.NULL_PE) then !no other valid cases except NULL_PE call mpp_error(FATAL
integer mpp_domains_stack_size
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len get_data(i)
logical, pointer fill
real(double), parameter one
logical function received(this, seqno)
integer, save, private isc
Definition: oda_core.F90:124
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************subroutine READ_RECORD_CORE_(unit, field, nwords, data, start, axsiz) integer, intent(in) ::unit type(fieldtype), intent(in) ::field integer, intent(in) ::nwords MPP_TYPE_, intent(inout) ::data(nwords) integer, intent(in) ::start(:), axsiz(:) integer(SHORT_KIND) ::i2vals(nwords)!rab used in conjunction with transfer intrinsic to determine size of a variable integer(KIND=1) ::one_byte(8) integer ::word_sz!#ifdef __sgi integer(INT_KIND) ::ivals(nwords) real(FLOAT_KIND) ::rvals(nwords)!#else! integer ::ivals(nwords)! real ::rvals(nwords)!#endif real(DOUBLE_KIND) ::r8vals(nwords) pointer(ptr1, i2vals) pointer(ptr2, ivals) pointer(ptr3, rvals) pointer(ptr4, r8vals) if(mpp_io_stack_size< nwords) call mpp_io_set_stack_size(nwords) call mpp_error(FATAL, 'MPP_READ currently requires use_netCDF option') end subroutine READ_RECORD_CORE_ subroutine READ_RECORD_(unit, field, nwords, data, time_level, domain, position, tile_count, start_in, axsiz_in)!routine that is finally called by all mpp_read routines to perform the read!a non-netCDF record contains:! field ID! a set of 4 coordinates(is:ie, js:je) giving the data subdomain! a timelevel and a timestamp(=NULLTIME if field is static)! 3D real data(stored as 1D)!if you are using direct access I/O, the RECL argument to OPEN must be large enough for the above!in a global direct access file, record position on PE is given by %record.!Treatment of timestamp:! We assume that static fields have been passed without a timestamp.! Here that is converted into a timestamp of NULLTIME.! For non-netCDF fields, field is treated no differently, but is written! with a timestamp of NULLTIME. There is no check in the code to prevent! the user from repeatedly writing a static field. integer, intent(in) ::unit, nwords type(fieldtype), intent(in) ::field MPP_TYPE_, intent(inout) ::data(nwords) integer, intent(in), optional ::time_level type(domain2D), intent(in), optional ::domain integer, intent(in), optional ::position, tile_count integer, intent(in), optional ::start_in(:), axsiz_in(:) integer, dimension(size(field%axes(:))) ::start, axsiz integer ::tlevel !, subdomain(4) integer ::i, error, is, ie, js, je, isg, ieg, jsg, jeg type(domain2d), pointer ::io_domain=> tlevel if(PRESENT(start_in) .AND. PRESENT(axsiz_in)) then if(size(start(! the data domain and compute domain must refer to the subdomain being passed ! In this ! since that attempts to gather all data on PE size(field%axes(:)) axsiz(i)
integer, save, private jsc
Definition: oda_core.F90:124
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT get_len end if return end subroutine MPP_TRANSMIT_ ! MPP_BROADCAST ! subroutine but that doesn t allow !broadcast to a subset of PEs This version and mpp_transmit will remain !backward compatible intent(inout) a
#define max(a, b)
Definition: mosaic_util.h:33
*f90 *************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************subroutine MPP_UPDATE_NEST_FINE_2D_(field, nest_domain, wbuffer, ebuffer, sbuffer, nbuffer, &flags, complete, position, extra_halo, name, tile_count) MPP_TYPE_, intent(in) ::field(:,:) type(nest_domain_type), intent(inout) ::nest_domain MPP_TYPE_, intent(inout) ::wbuffer(:,:) MPP_TYPE_, intent(inout) ::ebuffer(:,:) MPP_TYPE_, intent(inout) ::sbuffer(:,:) MPP_TYPE_, intent(inout) ::nbuffer(:,:) integer, intent(in), optional ::flags logical, intent(in), optional ::complete integer, intent(in), optional ::position integer, intent(in), optional ::extra_halo character(len= *), intent(in), optional ::name integer, intent(in), optional ::tile_count MPP_TYPE_ ::field3D(size(field, 1), size(field, 2), 1) MPP_TYPE_ ::wbuffer3D(size(wbuffer, 1), size(wbuffer, 2), 1) MPP_TYPE_ ::ebuffer3D(size(ebuffer, 1), size(ebuffer, 2), 1) MPP_TYPE_ ::sbuffer3D(size(sbuffer, 1), size(sbuffer, 2), 1) MPP_TYPE_ ::nbuffer3D(size(nbuffer, 1), size(nbuffer, 2), 1) pointer(ptr, field3D) pointer(ptr_w, wbuffer3D) pointer(ptr_e, ebuffer3D) pointer(ptr_s, sbuffer3D) pointer(ptr_n, nbuffer3D) ptr=LOC(field) ptr_w=LOC(wbuffer) ptr_e=LOC(ebuffer) ptr_s=LOC(sbuffer) ptr_n=LOC(nbuffer) call mpp_update_nest_fine(field3D, nest_domain, wbuffer3D, ebuffer3D, sbuffer3D, nbuffer3D, &flags, complete, position, extra_halo, name, tile_count) returnend subroutine MPP_UPDATE_NEST_FINE_2D_subroutine MPP_UPDATE_NEST_FINE_3D_(field, nest_domain, wbuffer, sbuffer, ebuffer, nbuffer, &flags, complete, position, extra_halo, name, tile_count) MPP_TYPE_, intent(in) ::field(:,:,:) type(nest_domain_type), intent(inout) ::nest_domain MPP_TYPE_, intent(inout) ::wbuffer(:,:,:) MPP_TYPE_, intent(inout) ::ebuffer(:,:,:) MPP_TYPE_, intent(inout) ::sbuffer(:,:,:) MPP_TYPE_, intent(inout) ::nbuffer(:,:,:) integer, intent(in), optional ::flags logical, intent(in), optional ::complete integer, intent(in), optional ::position integer, intent(in), optional ::extra_halo character(len= *), intent(in), optional ::name integer, intent(in), optional ::tile_count MPP_TYPE_ ::d_type type(nestSpec), pointer ::update=> dimension(MAX_DOMAIN_FIELDS)
integer, save, private jec
Definition: oda_core.F90:124
l_size ! loop over number of fields ke do je do ie pos
*f90 *************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If not
l_size ! loop over number of fields ke do je do ie to js
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT get_len end if return end subroutine MPP_TRANSMIT_ ! MPP_BROADCAST ! subroutine but that doesn t allow !broadcast to a subset of PEs This version and mpp_transmit will remain !backward compatible intent(inout) MPP_BROADCAST begin