11 #ifndef OOPS_ASSIMILATION_MINIMIZER_H_    12 #define OOPS_ASSIMILATION_MINIMIZER_H_    16 #include <boost/noncopyable.hpp>    18 #include "eckit/config/Configuration.h"    28 #include "oops/util/abor1_cpp.h"    29 #include "oops/util/dot_product.h"    30 #include "oops/util/formats.h"    31 #include "oops/util/Logger.h"    32 #include "oops/util/PrintAdjTest.h"    39 template<
typename MODEL> 
class Minimizer : 
private boost::noncopyable {
    51   virtual const std::string 
classname() 
const = 0;
    56   void adjTests(
const eckit::Configuration &);
    60   void tlmTests(
const eckit::Configuration &);
    72 template<
typename MODEL>
    75   this->tlmTests(config);
    78   this->adjTests(config);
    84   this->tlmPropagTest(config, *dx);
    94 template<
typename MODEL>
    98   if (config.has(
"onlineDiagnostics")) {
    99     const eckit::LocalConfiguration onlineDiag(config, 
"onlineDiagnostics");
   100     bool runTlmTaylorTest = onlineDiag.getBool(
"tlmTaylorTest");
   101     bool runTlmApproxTest = onlineDiag.getBool(
"tlmApproxTest");
   108     if (outerIteration_ == 0 && runTlmApproxTest) this->tlmApproxTest(H);
   111     if (outerIteration_ == 0 && runTlmTaylorTest) this->tlmTaylorTest(H);
   117 template<
typename MODEL>
   121   if (config.has(
"onlineDiagnostics")) {
   122     const eckit::LocalConfiguration onlineDiag(config, 
"onlineDiagnostics");
   123     bool runAdjTlmTest    = onlineDiag.getBool(
"adjTlmTest");
   124     bool runAdjObsTest    = onlineDiag.getBool(
"adjObsTest");
   131     if (runAdjTlmTest) this->adjModelTest(Ht, H);
   134     if (runAdjObsTest) this->adjObsTest(Ht, H);
   140 template<
typename MODEL>
   151               << 
"TLM Linear Approximation Test - starting: " << outerIteration_
   152               << std::endl << std::endl;
   158   J_.jb().randomize(dx);
   167   J_.addIncrement(mpertxx, dx);
   168   J_.runNL(mpertxx, pp);
   176   Log::info() << std::endl << 
"TLM Linear Approximation Test: done." << std::endl;
   181 template<
typename MODEL>
   192   if (config.has(
"onlineDiagnostics")) {
   193     const eckit::LocalConfiguration onlineDiag(config, 
"onlineDiagnostics");
   194     bool runTlmPropagTest = onlineDiag.getBool(
"tlmPropagTest");
   196     if (runTlmPropagTest) {
   198       Log::info() << 
"TLM Propagation Test - starting: " << outerIteration_
   199                   << std::endl << std::endl;
   210       Log::info() << std::endl << 
"TLM Propagation Test: done." << std::endl;
   217 template<
typename MODEL>
   225               << 
"TLM Taylor Test: " << outerIteration_
   232   J_.jb().randomize(dx);
   245   for (
unsigned int jj = 0; jj < 14; ++jj) {
   248      pmdx *= 1./pow(10.0, jj);
   249      double denom = sqrt(dot_product(pmdx, pmdx));
   254      pdx *= 1./pow(10.0, jj);
   255      J_.addIncrement(mpertxx, pdx);
   256      J_.runNL(mpertxx, pp);
   260      diff_nl.
state()[0].
diff(mpertxx.state()[0], mxx.state()[0]);
   261      double nom = sqrt(dot_product(diff_nl, diff_nl));
   265                  << 
"TLM Taylor test:  p = " << std::setw(8) << 1./pow(10.0, jj)
   266                  << 
", ||M(x) - M(x+p dx)|| / ||p M'(dx)|| = "   267                  << util::full_precision(1.+std::abs(1.-nom/denom))
   275 template<
typename MODEL>
   287   J_.jb().randomize(dx1);
   288   J_.jb().randomize(dx2);
   298   mtdx2.
state()[0].updateTime(mdx1.
state()[0].validTime() - dx1.state()[0].validTime());
   302   double adj_tst_fwd = dot_product(mdx1, dx2);
   305   double adj_tst_bwd = dot_product(dx1, mtdx2);
   308   Log::info() << 
"Model Adjoint Test: " << outerIteration_ << std::endl
   309               << util::PrintAdjTest(adj_tst_fwd, adj_tst_bwd, 
"M")
   310               << std::endl << std::endl;
   315 template<
typename MODEL>
   333   J_.jb().randomize(dx1);
   334   J_.jb().randomize(dx2);
   345   double adj_tst_fwd = dot_product(hdx1, hdx2);
   348   double adj_tst_bwd = dot_product(dx1, hthdx2);
   351   Log::info() << 
"Obs Adjoint Test: " << outerIteration_ << std::endl
   352               << util::PrintAdjTest(adj_tst_fwd, adj_tst_bwd, 
"H")
   353               << std::endl << std::endl;
   359 template <
typename MODEL>
   369   static std::map < std::string, MinFactory<MODEL> * > & 
getMakers() {
   370     static std::map < std::string, MinFactory<MODEL> * > makers_;
   377 template<
class MODEL, 
class FCT>
   381     return new FCT(
conf, J);
   389 template <
typename MODEL>
   391   if (getMakers().find(
name) != getMakers().
end()) {
   392     Log::error() << 
name << 
" already registered in minimizer factory." << std::endl;
   393     ABORT(
"Element already registered in MinFactory.");
   395   getMakers()[
name] = 
this;
   400 template <
typename MODEL>
   403   std::string 
id = config.getString(
"algorithm");
   404   Log::info() << 
"Minimizer algorithm=" << 
id << std::endl;
   405   typename std::map<std::string, MinFactory<MODEL>*>::iterator 
j = getMakers().find(
id);
   406   if (
j == getMakers().
end()) {
   407     Log::error() << 
id << 
" does not exist in minimizer factory." << std::endl;
   408     ABORT(
"Element does not exist in MinFactory.");
   410   return (*j).second->make(config, J);
   417 #endif  // OOPS_ASSIMILATION_MINIMIZER_H_ 
Container of dual space vectors for all terms of the cost function. 
 
void tlmApproxTest(const H_ &)
 
ControlIncrement< MODEL > * minimize(const eckit::Configuration &)
 
CostFunction< MODEL > CostFct_
 
virtual Minimizer< MODEL > * make(const eckit::Configuration &, const CostFct_ &)=0
 
MinMaker(const std::string &name)
 
************************************************************************GNU Lesser General Public License **This file is part of the GFDL Flexible Modeling System(FMS). ! *! *FMS is free software without even the implied warranty of MERCHANTABILITY or *FITNESS FOR A PARTICULAR PURPOSE See the GNU General Public License *for more details **You should have received a copy of the GNU Lesser General Public *License along with FMS If see< http:! ***********************************************************************!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !! MPP_TRANSMIT !! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! subroutine MPP_TRANSMIT_(put_data, put_len, to_pe, get_data, get_len, from_pe, block, tag, recv_request, send_request)!a message-passing routine intended to be reminiscent equally of both MPI and SHMEM!put_data and get_data are contiguous MPP_TYPE_ arrays!at each call, your put_data array is put to to_pe 's get_data! your get_data array is got from from_pe 's put_data!i.e we assume that typically(e.g updating halo regions) each PE performs a put _and_ a get!special PE designations:! NULL_PE:to disable a put or a get(e.g at boundaries)! ANY_PE:if remote PE for the put or get is to be unspecific! ALL_PES:broadcast and collect operations(collect not yet implemented)!ideally we would not pass length, but this f77-style call performs better(arrays passed by address, not descriptor)!further, this permits< length > contiguous words from an array of any rank to be passed(avoiding f90 rank conformance check)!caller is responsible for completion checks(mpp_sync_self) before and after integer, intent(in) ::put_len, to_pe, get_len, from_pe MPP_TYPE_, intent(in) ::put_data(*) MPP_TYPE_, intent(out) ::get_data(*) logical, intent(in), optional ::block integer, intent(in), optional ::tag integer, intent(out), optional ::recv_request, send_request logical ::block_comm integer ::i MPP_TYPE_, allocatable, save ::local_data(:) !local copy used by non-parallel code(no SHMEM or MPI) integer ::comm_tag integer ::rsize if(.NOT.module_is_initialized) call mpp_error(FATAL, 'MPP_TRANSMIT:You must first call mpp_init.') if(to_pe.EQ.NULL_PE .AND. from_pe.EQ.NULL_PE) return block_comm=.true. if(PRESENT(block)) block_comm=block if(debug) then call SYSTEM_CLOCK(tick) write(stdout_unit,'(a, i18, a, i6, a, 2i6, 2i8)')&'T=', tick, ' PE=', pe, ' MPP_TRANSMIT begin:to_pe, from_pe, put_len, get_len=', to_pe, from_pe, put_len, get_len end if comm_tag=DEFAULT_TAG if(present(tag)) comm_tag=tag!do put first and then get if(to_pe.GE.0 .AND. to_pe.LT.npes) then!use non-blocking sends if(debug .and.(current_clock.NE.0)) call SYSTEM_CLOCK(start_tick)!z1l:truly non-blocking send.! if(request(to_pe).NE.MPI_REQUEST_NULL) then !only one message from pe-> to_pe in queue *PE waiting for to_pe ! call error else get_len so only do gets but you cannot have a pure get with MPI call a get means do a wait to ensure put on remote PE is complete error call increase mpp_nml request_multiply call MPP_TRANSMIT end
 
CostFunction< MODEL > CostFct_
 
void diff(const State4D_ &, const State4D_ &)
Linear algebra operators. 
 
void adjModelTest(const Ht_ &, const H_ &)
 
Encapsulates the model state. 
 
void multiply(CtrlInc_ &dx, DualVector< MODEL > &dy, const bool idModel=false) const
 
l_size ! loop over number of fields ke do j
 
void adjTests(const eckit::Configuration &)
 
static Minimizer< MODEL > * create(const eckit::Configuration &, const CostFct_ &)
 
virtual ControlIncrement< MODEL > * doMinimize(const eckit::Configuration &)=0
 
The namespace for the main oops code. 
 
virtual const std::string classname() const =0
 
void adjObsTest(const Ht_ &, const H_ &)
 
Increment4D_ & state()
Get state control variable. 
 
void multiply(const DualVector< MODEL > &dy, ControlIncrement< MODEL > &dx, const bool idModel=false) const
 
Minimizer(const CostFct_ &J)
 
subroutine, public info(self)
 
CostFunction< MODEL > CostFct_
 
void tlmTests(const eckit::Configuration &)
 
virtual Minimizer< MODEL > * make(const eckit::Configuration &conf, const CostFct_ &J)
 
DualVector< MODEL > Dual_
 
static std::map< std::string, MinFactory< MODEL > *> & getMakers()
 
void tlmTaylorTest(const H_ &)
 
ControlIncrement< MODEL > CtrlInc_
 
Control model post processing. 
 
A Minimizer knows how to minimize a cost function. 
 
void tlmPropagTest(const eckit::Configuration &config, const CtrlInc_ &)
 
MinFactory(const std::string &)